Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015954336.1_cds_XP_016493240.1_83370
CDS Infomation

[gene=LOC107812609] [db_xref=GeneID:107812609] [protein=probable polyamine oxidase 5] [protein_id=XP_016493240.1] [location=complement(17260..18891)] [gbkey=CDS]
Sequence

ATGGTGACACAAAAGCCAAAAATTGTGATAATTGGAGCTGGAATTTCTGGCCTAACAGCA
GCTAATAAACTCTATACAACAAAAAACTCAAATGAATTATTTGAGCTTTGTGTTGTTGAA
GGTGGAAATAGAATTGGTGGAAGAATTTTTACCTCAGAATTTAATGGTGATCAAATTGAA
ATGGGAGCTACATGGATACATGGAATTGAAGGTAATCCAATTTACAAAATTGCTCAAGAA
ATTAATTCATTGGAATCAAACAAGCCTTGGGAATGTAAAGAAGGTAAATTAATGGACAAA
AAAGTGACTATAACAGAAAATGGCTATGAGGTAAATTCTTCCCTTGTTAAATCCATATCA
GTATTTTTCAACAAAATGTTAGCTTTTTCTTCAGGTGAAGGAAATTTTCAAGATGAGGCA
TGTAAAGAAATTCTTGAAAGTTTTAATCTTGAAAATGGTAGTATTAAAAATCTAAGTATT
GGTTCTTTTCTTAGGAAAGGTCTTGAATTTTATTGGAATTTAAAGAAAGATCAAGAAAAT
GTTGAAGTGTTTGATAAATGGAGTAGAAAATCACTTGAAGAAGGAATTTTTGCTATGTTT
GAGAATATACATAGGCATTATTCATCAGCTGGTGATTTGGGTACTTTAGATTTTAATGGA
GAAAGTCAGTATTGTAATTTTCCTGGAGATGAACTAACTATAGCTAAAGGGTACTCAACT
GTGGTTAAATCTTTGGCATCTGTTTTACCACCTGGTTTGATTCAATTAGGCCGAAAAGTC
ACGAAAATTGAATGGCGAAACGATGACTGTGCCTCAAAATTTGAAAATGGTGATGGTACT
AAGCCAGTGAAGCTGCATTTTAGTGATGGATCAGTAATGCATGCTGATCATGTTATTGTA
ACAGTCTCATTAGGGGTCCTAAAACAAGGAATTCACGACGATTCTGGTTTTTTTAGCCCT
CAACTTCCTAGTTTCAAGACTGAAGCAATTTCAAGACTTGGTTTTGGTGTTGTTGACAAG
TTATTCTTGCAACTTAGCTCAAGTAATGAAGAATGTGGCTATGATGGGATGAATTTTCCA
TACTTGCAAATGGTTTTTCATCAATCGGACACGAAATTATTTCGCTCAAAAATTCCCTTA
TGGATTAGGAGGACAGCTCTTATACATCCAATTTATCCTAAGTCAAGTACTATAGTATCA
TGGTTTGCAGGTAAAGAAGCTCTTGAGATGGAAACTCTAGGTGATGAGGAGATCATAGAC
GGGGTTTCGACAACAATGTCACAGTTTCTAGCAAACTCAAAGTATTTCAAGAACTCAGAT
TCTGCAACAGCAGAAAGTTGTGTTAAGTTTTCTAAGGTTTTGAAGTGTAAATGGGGTACT
GATCCGTTGTTTTTGGGATCATATACTCATATTGCTGTTGGATCAAGTGGAGATGATTTG
GATTCTATGGCTGAGCCATTGCCTAAAGTGGAAAATTGTGGTGAAAATTCAAAGAATTTC
CCTCCACTTCAGATTTTATTTGCAGGAGAAGCAACACATAGATGCTATTATTCAACAACT
CATGGTGCTTATCTTACTGGAATTAGAGAAGCCAATAGGCTACTTAAGCACTTTCAATGT
GTTGATGTCTGA

Peptide Sequence

PEP ID

XP_016493240.1
PEP Infomation

PREDICTED: probable polyamine oxidase 5 [Nicotiana tabacum]
Sequence

MVTQKPKIVIIGAGISGLTAANKLYTTKNSNELFELCVVEGGNRIGGRIFTSEFNGDQIE
MGATWIHGIEGNPIYKIAQEINSLESNKPWECKEGKLMDKKVTITENGYEVNSSLVKSIS
VFFNKMLAFSSGEGNFQDEACKEILESFNLENGSIKNLSIGSFLRKGLEFYWNLKKDQEN
VEVFDKWSRKSLEEGIFAMFENIHRHYSSAGDLGTLDFNGESQYCNFPGDELTIAKGYST
VVKSLASVLPPGLIQLGRKVTKIEWRNDDCASKFENGDGTKPVKLHFSDGSVMHADHVIV
TVSLGVLKQGIHDDSGFFSPQLPSFKTEAISRLGFGVVDKLFLQLSSSNEECGYDGMNFP
YLQMVFHQSDTKLFRSKIPLWIRRTALIHPIYPKSSTIVSWFAGKEALEMETLGDEEIID
GVSTTMSQFLANSKYFKNSDSATAESCVKFSKVLKCKWGTDPLFLGSYTHIAVGSSGDDL
DSMAEPLPKVENCGENSKNFPPLQILFAGEATHRCYYSTTHGAYLTGIREANRLLKHFQC
VDV

Transcript Sequence

Gene sequence data has not been registered.